BibTeX Entries

Journal Publications

1. Algebra of Synchronization with Application to Deadlock and Semaphores (International Journal of Networking and Computing - IJNC) [pdf]
2. A more accurate reconstruction system matrix for quantitative proton computed tomography (Journal of Medical Physics - MedPhys) [pdf]
3. A maximum likelihood proton path formalism for application in proton computed tomography (Journal of Medical Physics - MedPhys) [pdf]
4. Software-Based Algorithm for Modeling and Correction of Gradient Nonlinearity Distortions in Magnetic Resonance Imaging, (IAENG Transactions on Electrical and Electronics Engineering). [pdf]
5. Performance Study of and Optoelectronic Localization System for Functional Proton Radiosurgery(INT J RADIAT ONCOL BIOL PHYS) [pdf]
6. Degenerate Minmin Paper (SIMAX) [pdf] [psz]

Book Chapters

1. Estimation, Modeling, and Simulation of Patterned Growth in Extreme Environments (Software Tools and Algorithms for Biological Systems) Springer, 2010. [pdf]
2. Dr. Math Gets You Ready for Algebra: Learning Pre-Algebra is Easy! Just Ask Dr. Math!, Jossey-Bass publishers, 2003.

Peer Reviewed Conference Publications

1. Space Carving and Filtered Back Projection as Preconditioners for Proton Computed Tomography Reconstruction(IEEE Nuclear Science Symposium Medical Imaging Conference)
2. A Proton Simulator for Testing Implementations of Proton CT Reconstruction Algorithms on GPGPU Clusters(IEEE Nuclear Science Symposium Medical Imaging Conference)
3. Phantom Design for Distortion Correction of MR Images(34th International IEEE EMBS Conference) [pdf]
4. Accurate Proton Beam Localization(Biocomp2012) [pdf]
5. Computational Algorithm for Estimating the Gradient Isocenter of an MRI Scanner (CSC12) [pdf]
6. Constellation Design of a Lunar Global Positioning System Using CubeSats and Chip-Scale Atomic Clocks(ESA12) [pdf]
7. Life Detection Using Biopatterning(Lunar and Planetary Institute’s Conference on Life Detection in Extraterrestrial Samples)
8. Biopatterning(Lunar and Planetary Institute’s First International Planetary Cave Research Workshop) [pdf]
9. Anode Effects On Microbial Fuel Cell Efficiency(Biocomp2011) [pdf]
10. Algebra of Synchronization with Application to Deadlock and Semaphores (PDAA'10 2nd International Workshop on Parallel and Distributed Algorithms and Applications) [pdf]
11. To Live and Die in CA(Biocomp 2010) [pdf]
12. General Purpose Graphics Processing Unit Speedup of Integral Relative Electron Density Calculation for Proton Computed Tomography (IEEE High Performance Medical Imaging Workshop 2009) [pdf]
13. Simulating Spatial Partial Differential Equations with Cellular Automata(Biocomp 2009) [pdf]
14. Patterned Growth in Extreme Environments (NASA JPL/IEEE SMC-IT 2009) [pdf]
15. Extensible Simulation of Planets and Comets (NASA JPL/IEEE SMC-IT 2009) [pdf]
16. Block-Iterative and String-Averaging Projection Algorithms in Proton Computed Tomography Image Reconstruction (The Huangguoshu International Interdisciplinary Conference on Biomedical Mathematics: Promising Directions in Imaging, Therapy Planning and Inverse Problems -2009) [pdf]
17. Development of Proton Computed Tomography for Applications in Proton Therapy (CAARI 2008) [pdf]
18. Computational Algorithm for Modeling and Correction of Gradient Nonlinearity Distortions in Magnetic Resonance Imaging (World Conference of Engineering and Computer Science 2008) [pdf]
19. Biovermiculations (Geological Society of America (GSA) National Conference, 2008)
20. Patterned Growth in Extreme Environments (Bioastronomy-2007) [pdf]
21. Performance Analysis of an Optoelectronic Localization System for Monitoring Brain Lesioning with Proton Beams (IEEE EMBS-2007) [pdf]
22. Localization of Network Nodes for Extra-Terrestrial Deployment (IEEE/NASA/JPL SMCIT-2006) [pdf]
23. Gradient Non-Linearity Correction of MR Images for Functional Radiosurgery (IEEE/ACIS ICIS-2006) [pdf]
24. Software Development For Correction Of Gradient-Nonlinearity Distortions In MR Images (ICCSA-2006) [ps] [pdf]
25. A Scalable Distributed Datastore for BioImaging (ICCSA-2006) [ps] [pdf]
26. Multiple Column Partitioned Min Max Estimation (ICCSA-2005) [ps] [pdf]
27. Orthogonal and Least-Squares Based Coordinate Transforms for Optical Alignment Verification in Radiosurgery (IEEE ITTC-2005) [pdf]
28. A System for Functional Proton Radiosurgery (International Meeting for Brain Mapping and Surgical Treatment Planning, 2005)
29. Image-guided Alignment Verification with Submillimeter Precision for Functional Proton Radiosurgery (2005 Annual Meeting of the American Society for Therapeutic Radiology and Oncology)
30. Preventing Deadlock with Dynamic Message Scheduling (IEEE 18th International Conference on Systems Engineering-2005)
31. "pi to e" Paper (ICCSA-2004) [pdf]
32. Utility Computing Paper(ICCSA-2004) [pdf]
33. Backward Error Paper (HICCS-2004) [ps] [pdf]
34. Deadlock Paper (HICCS-2004) [pdf]
35. Network Flow Paper (HICCS-2004) [pdf]
36. Analysis of Network Test Equipment Emulation and Measurement (HICCS-2004)
37. Survey Paper (ICCSA-2003) [ps] [pdf]
38. Leuven Conference Survey Paper [pdf]